Like M3eater said, you can use either one. The polyester resin is cheaper and easier to find by the gallon at your chain auto parts or hardware stores. It's also hard to mix wrong with the hardener, meaning if you add too much, it just hardens quicker, and the opposite when you add a little less. With the epoxy you have to be pretty close to the mixing ratio.
Either way you choose to go with the resin, I'd run a 6-8" wide strip of mat along the edges of the floor where it meets the hull sides and transom, then glass the whole floor in so that the floor-hull joints in effect have two layers of mat. A surprising amount of structural rigidity comes from the floor-hull joint on a lot of boats.
Joe
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USCG 50 Ton Master Inland/OUPV Endorsement+Towing
1998 278 Vista - Twin 4.3 GLs, Kohler 4KW Gen, AC/Heat.
1999 Yamaha Waverunner SUV
2003 Yamaha Waverunner SUV w/MR-1 HO conversion
